Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad/fmn-containing dehydrogenase | CLV75_1848 | Not Available | Positive | 1803333 - 1804898 | 59444.1 |
| hypothetical protein | CLV75_1849 | Not Available | Positive | 1804938 - 1806611 | 62611.3 |
| ferritin-like protein | CLV75_1850 | Not Available | Positive | 1806604 - 1808364 | 66447.9 |
| uncharacterized protein | CLV75_1851 | Not Available | Positive | 1808361 - 1809671 | 47561.5 |
| flavin-dependent dehydrogenase | CLV75_1852 | Not Available | Positive | 1809640 - 1811091 | 53066.9 |
| lipopolysaccharide export system permease protein | CLV75_1853 | Not Available | Positive | 1811164 - 1812297 | 41170.2 |
| hd domain-containing protein | CLV75_1854 | Not Available | Positive | 1812383 - 1812973 | 23021.5 |
| agmatinase | CLV75_1855 | Not Available | Negative | 1812970 - 1813812 | 30306.9 |
| carboxynorspermidine decarboxylase | CLV75_1856 | Not Available | Negative | 1813809 - 1814978 | 42578.6 |
| carboxynorspermidine dehydrogenase | CLV75_1857 | Not Available | Negative | 1815087 - 1816298 | 44998.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
