Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | CLV75_1838 | Not Available | Negative | 1791551 - 1792168 | 21867.0 |
| dna topoisomerase iv subunit a | CLV75_1839 | Not Available | Positive | 1792370 - 1794718 | 87518.0 |
| hypothetical protein | CLV75_1840 | Not Available | Positive | 1794817 - 1795410 | 21831.9 |
| translation elongation factor 1a (ef-1a/ef-tu) | CLV75_1841 | Not Available | Positive | 1795525 - 1796700 | 42805.1 |
| hypothetical protein | CLV75_1842 | Not Available | Positive | 1796709 - 1797629 | 34656.3 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | CLV75_1843 | Not Available | Negative | 1797779 - 1798120 | 12465.0 |
| hypothetical protein | CLV75_1844 | Not Available | Positive | 1798491 - 1798697 | 7892.18 |
| hypothetical protein | CLV75_1845 | Not Available | Negative | 1798764 - 1799468 | 26610.3 |
| Trna-trp | Not Available | Not Available | Positive | 1799601 - 1799676 | Not Available |
| sam (sterile alpha motif) domain-containing protein | CLV75_1847 | Not Available | Positive | 1799895 - 1803209 | 121065.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
