Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | CLV75_1808 | Not Available | Positive | 1767079 - 1767918 | 30823.9 |
| rnase iii | CLV75_1809 | Not Available | Positive | 1767915 - 1768592 | 24376.2 |
| ribosomal protein s18 acetylase rimi-like enzyme | CLV75_1810 | Not Available | Positive | 1768612 - 1769124 | 18822.2 |
| ftsp/cota-like multicopper oxidase with cupredoxin domain | CLV75_1811 | Not Available | Negative | 1769127 - 1770503 | 50163.5 |
| gtp-binding protein era | CLV75_1812 | Not Available | Positive | 1770662 - 1771570 | 33741.8 |
| hypothetical protein | CLV75_1813 | Not Available | Positive | 1771567 - 1771896 | 12316.5 |
| uncharacterized protein with pq loop repeat | CLV75_1814 | Not Available | Positive | 1772008 - 1772331 | 11896.9 |
| putative lactoylglutathione lyase | CLV75_1815 | Not Available | Negative | 1772363 - 1772752 | 13854.2 |
| dna replication and repair protein reco | CLV75_1816 | Not Available | Positive | 1772916 - 1773641 | 26285.7 |
| heat shock protein hslj | CLV75_1817 | Not Available | Negative | 1773625 - 1774014 | 14109.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
