Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | CLV75_1788 | Not Available | Positive | 1753043 - 1753537 | 18557.6 |
| methionyl-trna formyltransferase | CLV75_1789 | Not Available | Positive | 1753580 - 1754494 | 32661.4 |
| hypothetical protein | CLV75_1790 | Not Available | Positive | 1754501 - 1754737 | 8473.74 |
| transglycosylase associated protein | CLV75_1791 | Not Available | Positive | 1754739 - 1754975 | 8319.87 |
| agmatinase | CLV75_1792 | Not Available | Positive | 1755038 - 1755859 | 29747.5 |
| hypothetical protein | CLV75_1793 | Not Available | Negative | 1755856 - 1756455 | 21512.9 |
| putative membrane protein yeih | CLV75_1794 | Not Available | Negative | 1756480 - 1757103 | 21582.9 |
| ribonuclease hi | CLV75_1795 | Not Available | Negative | 1757100 - 1757567 | 17191.2 |
| methyltransferase family protein | CLV75_1796 | Not Available | Negative | 1757560 - 1758150 | 21391.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CLV75_1797 | Not Available | Negative | 1758147 - 1759097 | 34283.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
