Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding winged helix-turn-helix (whth) protein | CLV75_1707 | Not Available | Negative | 1680561 - 1681733 | 43223.4 |
| hypothetical protein | CLV75_1708 | Not Available | Positive | 1681873 - 1682034 | 5953.58 |
| cobaltochelatase cobt subunit | CLV75_1709 | Not Available | Negative | 1682031 - 1683908 | 69531.6 |
| aspartate racemase | CLV75_1710 | Not Available | Negative | 1683905 - 1684606 | 24990.1 |
| cobaltochelatase cobs subunit | CLV75_1711 | Not Available | Negative | 1684620 - 1685606 | 36683.5 |
| dnae-like error-prone dna polymerase | CLV75_1712 | Not Available | Negative | 1685752 - 1689099 | 124401.0 |
| protein imub | CLV75_1713 | Not Available | Negative | 1689096 - 1690571 | 55572.2 |
| amino acid abc transporter atp-binding protein (paat family) | CLV75_1714 | Not Available | Negative | 1690673 - 1691404 | 26730.7 |
| amino acid abc transporter membrane protein (paat family) | CLV75_1715 | Not Available | Negative | 1691404 - 1692213 | 29972.3 |
| amino acid abc transporter substrate-binding protein (paat family) | CLV75_1716 | Not Available | Negative | 1692239 - 1693054 | 28748.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
