Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | CLV75_1687 | Not Available | Negative | 1658930 - 1660324 | 50899.7 |
| tetr family transcriptional regulator | CLV75_1688 | Not Available | Positive | 1660404 - 1661084 | 25438.6 |
| choline-glycine betaine transporter | CLV75_1689 | Not Available | Negative | 1661135 - 1662946 | 64545.3 |
| choline dehydrogenase | CLV75_1690 | Not Available | Negative | 1663247 - 1664842 | 58112.1 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV75_1691 | Not Available | Positive | 1664952 - 1666190 | 45638.1 |
| trap-type c4-dicarboxylate transport system permease small subunit | CLV75_1692 | Not Available | Positive | 1666256 - 1666921 | 24907.6 |
| tripartite atp-independent transporter dctm subunit | CLV75_1693 | Not Available | Positive | 1666921 - 1668279 | 47941.3 |
| iclr family transcriptional regulator | CLV75_1694 | Not Available | Positive | 1668291 - 1669070 | 28557.5 |
| hypothetical protein | CLV75_1695 | Not Available | Negative | 1669632 - 1670438 | 29339.1 |
| hypothetical protein | CLV75_1696 | Not Available | Positive | 1670755 - 1671930 | 43536.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
