Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf3604 | CLV75_1676 | Not Available | Negative | 1645392 - 1647266 | 68643.3 |
| hypothetical protein | CLV75_1678 | Not Available | Positive | 1648740 - 1648958 | 8078.65 |
| tetr family transcriptional regulator | CLV75_1679 | Not Available | Negative | 1649258 - 1649899 | 24232.8 |
| spermidine/putrescine transport system permease protein | CLV75_1680 | Not Available | Positive | 1650089 - 1650952 | 31250.2 |
| spermidine/putrescine transport system permease protein | CLV75_1681 | Not Available | Positive | 1650949 - 1651743 | 28939.2 |
| spermidine/putrescine transport system atp-binding protein | CLV75_1682 | Not Available | Positive | 1651764 - 1652879 | 41062.3 |
| putative spermidine/putrescine transport system substrate-binding protein | CLV75_1683 | Not Available | Positive | 1652876 - 1653931 | 38620.9 |
| dimethylamine/trimethylamine dehydrogenase | CLV75_1684 | Not Available | Positive | 1654025 - 1656091 | 75953.3 |
| rieske 2fe-2s family protein | CLV75_1685 | Not Available | Positive | 1656100 - 1657299 | 45392.5 |
| trimethylamine--corrinoid protein co-methyltransferase | CLV75_1686 | Not Available | Positive | 1657325 - 1658893 | 56770.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
