Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit alpha | CLV75_1666 | Not Available | Negative | 1635194 - 1636954 | 62821.9 |
| urease subunit beta | CLV75_1667 | Not Available | Negative | 1636929 - 1637261 | 11952.2 |
| hypothetical protein | CLV75_1668 | Not Available | Negative | 1637258 - 1637419 | 5625.13 |
| urease subunit gamma | CLV75_1669 | Not Available | Negative | 1637438 - 1637740 | 10990.4 |
| urease accessory protein | CLV75_1670 | Not Available | Negative | 1637742 - 1638539 | 28767.0 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | CLV75_1671 | Not Available | Positive | 1638954 - 1640234 | 46077.2 |
| amino acid/amide abc transporter membrane protein 1 (haat family) | CLV75_1672 | Not Available | Positive | 1640296 - 1642248 | 69619.8 |
| amino acid/amide abc transporter membrane protein 2 (haat family) | CLV75_1673 | Not Available | Positive | 1642252 - 1643481 | 44202.6 |
| urea transport system atp-binding protein | CLV75_1674 | Not Available | Positive | 1643478 - 1644218 | 27321.9 |
| amino acid/amide abc transporter atp-binding protein 2 (haat family) | CLV75_1675 | Not Available | Positive | 1644222 - 1644917 | 25662.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
