Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CLV75_1604 | Not Available | Positive | 1567059 - 1567961 | 32702.5 |
| carboxymethylenebutenolidase | CLV75_1605 | Not Available | Negative | 1568311 - 1569198 | 32632.4 |
| malonyl-coa/methylmalonyl-coa synthetase | CLV75_1606 | Not Available | Negative | 1569288 - 1570811 | 55676.2 |
| malonyl-coa decarboxylase | CLV75_1607 | Not Available | Negative | 1570808 - 1572106 | 48668.8 |
| dna-binding gntr family transcriptional regulator | CLV75_1608 | Not Available | Negative | 1572108 - 1572773 | 24984.8 |
| hypothetical protein | CLV75_1609 | Not Available | Negative | 1572816 - 1573202 | 13799.4 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | CLV75_1610 | Not Available | Positive | 1573287 - 1574171 | 31211.2 |
| 3-hydroxypropanoate dehydrogenase | CLV75_1611 | Not Available | Positive | 1574168 - 1574833 | 24880.8 |
| putative osmc-like protein | CLV75_1612 | Not Available | Positive | 1574846 - 1575307 | 16649.0 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV75_1613 | Not Available | Positive | 1575341 - 1576414 | 38402.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
