Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_0127 | Not Available | Negative | 120088 - 120672 | 21162.6 |
| poly(3-hydroxybutyrate) depolymerase | CLV75_0128 | Not Available | Negative | 120669 - 121943 | 47651.0 |
| polyhydroxyalkanoate synthase | CLV75_0129 | Not Available | Positive | 122055 - 123857 | 67348.0 |
| phasin protein | CLV75_0130 | Not Available | Positive | 123990 - 124436 | 15356.0 |
| polyhydroxyalkanoate synthesis repressor phar | CLV75_0131 | Not Available | Positive | 124573 - 125127 | 20853.0 |
| v8-like glu-specific endopeptidase | CLV75_0132 | Not Available | Positive | 125136 - 125897 | 27214.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | CLV75_0133 | Not Available | Negative | 125900 - 127099 | 43471.1 |
| gamma-glutamylputrescine oxidase | CLV75_0134 | Not Available | Negative | 127212 - 128516 | 46597.6 |
| l-glutamine synthetase | CLV75_0135 | Not Available | Negative | 128529 - 129887 | 50591.9 |
| gmp synthase (glutamine-hydrolysing) | CLV75_0136 | Not Available | Negative | 129887 - 130567 | 24975.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
