Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsp/cota-like multicopper oxidase with cupredoxin domain | CLV75_1594 | Not Available | Positive | 1557013 - 1558383 | 49907.2 |
| cbb3-type cytochrome c oxidase subunit iii | CLV75_1595 | Not Available | Positive | 1558383 - 1558856 | 17076.8 |
| protein-disulfide isomerase | CLV75_1596 | Not Available | Positive | 1558858 - 1559586 | 26518.7 |
| copper chaperone | CLV75_1597 | Not Available | Negative | 1559624 - 1559821 | 7060.42 |
| cu+-exporting atpase | CLV75_1598 | Not Available | Positive | 1559995 - 1562505 | 87041.7 |
| cu(i)-responsive transcriptional regulator | CLV75_1599 | Not Available | Positive | 1562521 - 1562907 | 14551.5 |
| hypothetical protein | CLV75_1600 | Not Available | Negative | 1563127 - 1563444 | 11807.3 |
| ferredoxin-nadp reductase | CLV75_1601 | Not Available | Negative | 1563840 - 1565825 | 72273.9 |
| hypothetical protein | CLV75_1602 | Not Available | Negative | 1565840 - 1566316 | 18835.9 |
| glutathione s-transferase | CLV75_1603 | Not Available | Negative | 1566329 - 1566952 | 21968.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
