Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-degrading monooxygenase hmoa | CLV75_1583 | Not Available | Negative | 1550638 - 1551006 | 13632.2 |
| dna-binding marr family transcriptional regulator | CLV75_1584 | Not Available | Positive | 1551110 - 1551598 | 18141.5 |
| hypothetical protein | CLV75_1586 | Not Available | Negative | 1552369 - 1552617 | 9148.72 |
| l,d-transpeptidase-like protein | CLV75_1587 | Not Available | Positive | 1552697 - 1553353 | 24340.0 |
| hypothetical protein | CLV75_1588 | Not Available | Negative | 1553364 - 1553636 | 9723.88 |
| lipoprotein-anchoring transpeptidase erfk/srfk | CLV75_1589 | Not Available | Positive | 1553998 - 1554579 | 21768.8 |
| cytochrome c | CLV75_1590 | Not Available | Positive | 1554649 - 1555098 | 15821.8 |
| hypothetical protein | CLV75_1591 | Not Available | Positive | 1555252 - 1555434 | 7165.88 |
| cytochrome c556 | CLV75_1592 | Not Available | Positive | 1555495 - 1556064 | 19511.7 |
| mono/diheme cytochrome c family protein | CLV75_1593 | Not Available | Positive | 1556074 - 1556973 | 32053.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
