Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_1533 | Not Available | Negative | 1505062 - 1505964 | 33510.6 |
| monosaccharide abc transporter substrate-binding protein (cut2 family) | CLV75_1534 | Not Available | Negative | 1506017 - 1507012 | 35456.7 |
| monosaccharide abc transporter membrane protein (cut2 family) | CLV75_1535 | Not Available | Negative | 1507069 - 1508061 | 34306.0 |
| ribose transport system atp-binding protein | CLV75_1536 | Not Available | Negative | 1508058 - 1509623 | 55388.7 |
| gntr family transcriptional regulator | CLV75_1537 | Not Available | Negative | 1509759 - 1510430 | 24956.0 |
| l-arabinonolactonase | CLV75_1538 | Not Available | Positive | 1510537 - 1511406 | 31443.7 |
| ribose transport system substrate-binding protein | CLV75_1539 | Not Available | Positive | 1511433 - 1512467 | 36347.0 |
| ribose transport system atp-binding protein | CLV75_1540 | Not Available | Positive | 1512552 - 1514075 | 54840.8 |
| ribose transport system permease protein | CLV75_1541 | Not Available | Positive | 1514072 - 1515073 | 34884.1 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | CLV75_1542 | Not Available | Positive | 1515075 - 1515863 | 28235.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
