Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | CLV75_1523 | Not Available | Positive | 1494917 - 1496311 | 49625.9 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | CLV75_1524 | Not Available | Positive | 1496313 - 1496918 | 22315.5 |
| dna-binding transcriptional lysr family regulator | CLV75_1525 | Not Available | Positive | 1496934 - 1497845 | 33565.2 |
| lysr family nitrogen assimilation transcriptional regulator | CLV75_1526 | Not Available | Negative | 1498011 - 1498934 | 33784.6 |
| crotonobetainyl-coa:carnitine coa-transferase caib-like acyl-coa transferase | CLV75_1527 | Not Available | Positive | 1499033 - 1500226 | 43299.1 |
| hydroxymethylglutaryl-coa lyase | CLV75_1528 | Not Available | Positive | 1500223 - 1501167 | 33400.9 |
| c4-dicarboxylate-binding protein dctp | CLV75_1529 | Not Available | Positive | 1501196 - 1502194 | 35352.7 |
| trap-type c4-dicarboxylate transport system permease small subunit | CLV75_1530 | Not Available | Positive | 1502196 - 1502726 | 19195.1 |
| c4-dicarboxylate transporter dctm subunit | CLV75_1531 | Not Available | Positive | 1502723 - 1504009 | 44880.4 |
| nad+ dependent glucose-6-phosphate dehydrogenase/l-arabinose 1-dehydrogenase | CLV75_1532 | Not Available | Negative | 1504265 - 1505074 | 29745.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
