Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l34p | CLV75_1513 | Not Available | Negative | 1485919 - 1486053 | 5153.46 |
| putative membrane protein ydjx (tvp38/tmem64 family) | CLV75_1514 | Not Available | Positive | 1486288 - 1487082 | 28200.1 |
| pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (e3) component | CLV75_1515 | Not Available | Positive | 1487086 - 1488504 | 50262.8 |
| hypothetical protein | CLV75_1516 | Not Available | Positive | 1488523 - 1489905 | 50578.6 |
| Trna-arg | Not Available | Not Available | Positive | 1489970 - 1490046 | Not Available |
| hypothetical protein | CLV75_1518 | Not Available | Positive | 1490244 - 1490396 | 5756.86 |
| c4-dicarboxylate transporter dctm subunit | CLV75_1519 | Not Available | Negative | 1490690 - 1492108 | 49744.2 |
| c4-dicarboxylate transporter dctq subunit | CLV75_1520 | Not Available | Negative | 1492108 - 1492773 | 24929.4 |
| c4-dicarboxylate-binding protein dctp | CLV75_1521 | Not Available | Negative | 1492844 - 1493845 | 36700.5 |
| haloacetate dehalogenase | CLV75_1522 | Not Available | Positive | 1494015 - 1494920 | 34205.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
