Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_1503 | Not Available | Negative | 1476946 - 1477599 | 23147.3 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | CLV75_1504 | Not Available | Negative | 1477596 - 1478408 | 30777.2 |
| n-acetylglutamate kinase | CLV75_1505 | Not Available | Negative | 1478448 - 1479311 | 29900.3 |
| gtp-binding protein | CLV75_1506 | Not Available | Negative | 1479372 - 1480025 | 23667.8 |
| hypothetical protein | CLV75_1507 | Not Available | Negative | 1480022 - 1480759 | 27463.5 |
| protein translocase subunit yidc | CLV75_1508 | Not Available | Negative | 1480756 - 1482579 | 67508.2 |
| diguanylate cyclase/phosphodiesterase | CLV75_1509 | Not Available | Negative | 1482706 - 1484247 | 56731.2 |
| trna 2-thiocytidine biosynthesis protein ttca | CLV75_1510 | Not Available | Negative | 1484318 - 1485202 | 33487.4 |
| hypothetical protein | CLV75_1511 | Not Available | Negative | 1485247 - 1485474 | 8518.24 |
| ribonuclease p protein component | CLV75_1512 | Not Available | Negative | 1485471 - 1485899 | 15596.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
