Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor 1a (ef-1a/ef-tu) | CLV75_1452 | Not Available | Positive | 1439076 - 1440251 | 42805.1 |
| hypothetical protein | CLV75_1453 | Not Available | Negative | 1440414 - 1441406 | 36852.9 |
| ssu ribosomal protein s10p | CLV75_1454 | Not Available | Positive | 1441759 - 1442073 | 11790.4 |
| lsu ribosomal protein l3p | CLV75_1455 | Not Available | Positive | 1442092 - 1442817 | 25328.5 |
| lsu ribosomal protein l4p | CLV75_1456 | Not Available | Positive | 1442814 - 1443431 | 22266.1 |
| lsu ribosomal protein l23p | CLV75_1457 | Not Available | Positive | 1443428 - 1443724 | 10723.0 |
| omega-6 fatty acid desaturase (delta-12 desaturase) | CLV75_1458 | Not Available | Positive | 1443893 - 1444927 | 39594.4 |
| dna-binding marr family transcriptional regulator | CLV75_1459 | Not Available | Negative | 1445127 - 1445633 | 19486.2 |
| polyisoprenoid-binding protein ycei | CLV75_1460 | Not Available | Positive | 1445672 - 1446253 | 20648.9 |
| lsu ribosomal protein l2p | CLV75_1461 | Not Available | Positive | 1446491 - 1447333 | 30455.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
