Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surfeit locus 1 family protein | CLV75_1412 | Not Available | Negative | 1393517 - 1394194 | 24909.2 |
| cytochrome c oxidase subunit 3 | CLV75_1413 | Not Available | Negative | 1394351 - 1395166 | 31335.3 |
| cytochrome c oxidase assembly protein subunit 11 | CLV75_1414 | Not Available | Negative | 1395189 - 1395764 | 21198.1 |
| hypothetical protein | CLV75_1415 | Not Available | Negative | 1395764 - 1395925 | 5942.34 |
| protoheme ix farnesyltransferase | CLV75_1416 | Not Available | Negative | 1395922 - 1396878 | 34520.3 |
| cytochrome c oxidase subunit 2 | CLV75_1417 | Not Available | Negative | 1396953 - 1397864 | 33169.9 |
| microcin-processing peptidase 2 | CLV75_1418 | Not Available | Positive | 1398041 - 1399462 | 49565.8 |
| dna protecting protein dpra | CLV75_1419 | Not Available | Positive | 1399701 - 1400852 | 40598.9 |
| dna topoisomerase i | CLV75_1420 | Not Available | Positive | 1401017 - 1403638 | 97574.2 |
| 3-oxoacid coa-transferase subunit a | CLV75_1421 | Not Available | Positive | 1403731 - 1404435 | 25333.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
