Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | CLV75_1371 | Not Available | Negative | 1349211 - 1350137 | 34362.2 |
| acetylornithine/n-succinyldiaminopimelate aminotransferase | CLV75_1372 | Not Available | Negative | 1350165 - 1351352 | 41570.9 |
| eama-like transporter family protein | CLV75_1373 | Not Available | Positive | 1351605 - 1352537 | 32776.5 |
| abc-2 type transport system permease protein | CLV75_1374 | Not Available | Negative | 1352519 - 1353322 | 28650.2 |
| gcra cell cycle regulator | CLV75_1375 | Not Available | Positive | 1353448 - 1354017 | 20477.7 |
| hypothetical protein | CLV75_1376 | Not Available | Positive | 1354327 - 1354563 | 9213.62 |
| uncharacterized protein (duf2235 family) | CLV75_1377 | Not Available | Negative | 1354671 - 1355747 | 40770.1 |
| carbon-monoxide dehydrogenase large subunit | CLV75_1378 | Not Available | Negative | 1355725 - 1358016 | 82706.3 |
| ectoine hydroxylase-related dioxygenase (phytanoyl-coa dioxygenase family) | CLV75_1379 | Not Available | Positive | 1358193 - 1359092 | 33006.2 |
| valyl-trna synthetase | CLV75_1380 | Not Available | Positive | 1359186 - 1362344 | 117695.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
