Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpir family transcriptional regulator | CLV75_1351 | Not Available | Positive | 1331065 - 1331952 | 32676.7 |
| phenylpropionate dioxygenase-like ring-hydroxylating dioxygenase large terminal subunit | CLV75_1352 | Not Available | Positive | 1331949 - 1333046 | 41715.9 |
| aldehyde dehydrogenase family protein | CLV75_1353 | Not Available | Positive | 1333080 - 1333979 | 32300.0 |
| 4-carboxymuconolactone decarboxylase | CLV75_1354 | Not Available | Positive | 1333966 - 1334346 | 14170.0 |
| protein-tyrosine phosphatase | CLV75_1355 | Not Available | Negative | 1334684 - 1335133 | 16501.3 |
| nad-dependent deacetylase | CLV75_1356 | Not Available | Positive | 1335162 - 1335866 | 25317.1 |
| uncharacterized membrane protein hded (duf308 family) | CLV75_1357 | Not Available | Positive | 1335895 - 1336536 | 22952.9 |
| hypothetical protein | CLV75_1358 | Not Available | Negative | 1336641 - 1337081 | 15405.4 |
| hypothetical protein | CLV75_1359 | Not Available | Negative | 1337127 - 1337477 | 12249.0 |
| lsu ribosomal protein l28p | CLV75_1360 | Not Available | Negative | 1337885 - 1338172 | 10300.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
