Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_1341 | Not Available | Negative | 1319463 - 1319783 | 11179.2 |
| hypothetical protein | CLV75_1342 | Not Available | Negative | 1320099 - 1320875 | 29581.9 |
| gtp-binding protein lepa | CLV75_1343 | Not Available | Negative | 1321055 - 1322854 | 66774.3 |
| hypothetical protein | CLV75_1344 | Not Available | Positive | 1322945 - 1324096 | 42244.0 |
| hypothetical protein | CLV75_1345 | Not Available | Positive | 1324261 - 1324569 | 11349.5 |
| lysr family transcriptional regulator | CLV75_1346 | Not Available | Positive | 1324635 - 1325576 | 34662.2 |
| glutamate-1-semialdehyde 2,1-aminomutase | CLV75_1347 | Not Available | Negative | 1325577 - 1326851 | 46001.3 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | CLV75_1348 | Not Available | Negative | 1326855 - 1327958 | 39604.7 |
| dimethylsulfoniopropionate lyase dddq | CLV75_1349 | Not Available | Negative | 1327955 - 1328557 | 22279.2 |
| dimethylglycine dehydrogenase | CLV75_1350 | Not Available | Negative | 1328554 - 1330968 | 88799.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
