Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1 subcomplex epsilon subunit | CLV75_1320 | Not Available | Negative | 1298479 - 1298889 | 14070.7 |
| atp synthase f1 subcomplex beta subunit | CLV75_1321 | Not Available | Negative | 1298902 - 1300326 | 50444.2 |
| f-type h+-transporting atpase subunit gamma | CLV75_1322 | Not Available | Negative | 1300347 - 1301222 | 31231.3 |
| atp synthase f1 subcomplex alpha subunit | CLV75_1323 | Not Available | Negative | 1301235 - 1302773 | 54928.8 |
| atp synthase f1 subcomplex delta subunit | CLV75_1324 | Not Available | Negative | 1302774 - 1303334 | 19783.0 |
| methyltransferase family protein | CLV75_1325 | Not Available | Negative | 1303637 - 1304371 | 27071.1 |
| hydroxyacylglutathione hydrolase | CLV75_1326 | Not Available | Positive | 1304433 - 1305200 | 27446.5 |
| atp-dependent clp protease atp-binding subunit clpa | CLV75_1327 | Not Available | Positive | 1305371 - 1307695 | 84690.2 |
| dj-1/pfpi family protein | CLV75_1328 | Not Available | Positive | 1307785 - 1308393 | 22282.5 |
| chemotaxis protein motb | CLV75_1329 | Not Available | Negative | 1308408 - 1310087 | 61409.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
