Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese-dependent inorganic pyrophosphatase | CLV75_1310 | Not Available | Positive | 1290395 - 1291315 | 32772.2 |
| had superfamily hydrolase (tigr01459 family) | CLV75_1311 | Not Available | Positive | 1291512 - 1292387 | 31624.5 |
| 3-hydroxybutyryl-coa dehydratase | CLV75_1312 | Not Available | Positive | 1292488 - 1292931 | 16331.9 |
| fmn adenylyltransferase /riboflavin kinase | CLV75_1313 | Not Available | Positive | 1292992 - 1293924 | 33711.3 |
| hypothetical protein | CLV75_1314 | Not Available | Positive | 1293921 - 1294394 | 18198.4 |
| l-threonine aldolase | CLV75_1315 | Not Available | Positive | 1294394 - 1295428 | 37327.3 |
| 2-hydroxychromene-2-carboxylate isomerase | CLV75_1316 | Not Available | Negative | 1295447 - 1296046 | 22047.1 |
| ribose-phosphate pyrophosphokinase | CLV75_1317 | Not Available | Positive | 1296155 - 1297174 | 37291.2 |
| nitroreductase | CLV75_1318 | Not Available | Negative | 1297226 - 1297918 | 26312.5 |
| h-type lectin domain-containing protein | CLV75_1319 | Not Available | Negative | 1298017 - 1298367 | 13061.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
