Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate dehydrogenase-like 2-hydroxyacid dehydrogenase | CLV75_1280 | Not Available | Negative | 1263573 - 1264523 | 33962.8 |
| pp_01254 | CLV75_1281 | Not Available | Negative | 1264523 - 1264861 | Not Available |
| pyrroline-5-carboxylate reductase | CLV75_1282 | Not Available | Negative | 1264854 - 1265669 | 27956.6 |
| hypothetical protein | CLV75_1283 | Not Available | Negative | 1265703 - 1266203 | 19122.4 |
| hypothetical protein | CLV75_1284 | Not Available | Negative | 1266518 - 1266766 | 9364.2 |
| prolipoprotein diacylglyceryl transferase | CLV75_1285 | Not Available | Positive | 1266864 - 1267751 | 32483.4 |
| sam-dependent mida family methyltransferase | CLV75_1286 | Not Available | Positive | 1267748 - 1268815 | 38323.9 |
| hypothetical protein | CLV75_1287 | Not Available | Positive | 1268812 - 1269570 | 26834.7 |
| hint domain-containing protein | CLV75_1288 | Not Available | Positive | 1270296 - 1271078 | 28222.0 |
| asnc family transcriptional regulator | CLV75_1289 | Not Available | Negative | 1271198 - 1271698 | 18524.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
