Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m48-like protein | CLV75_1260 | Not Available | Negative | 1242853 - 1243554 | 25426.3 |
| hypothetical protein | CLV75_1261 | Not Available | Positive | 1243675 - 1243923 | 9310.94 |
| nitroreductase | CLV75_1262 | Not Available | Positive | 1244061 - 1244639 | 20776.1 |
| uncharacterized protein involved in cysteine biosynthesis | CLV75_1263 | Not Available | Positive | 1244636 - 1245334 | 25480.0 |
| putative secreted protein | CLV75_1264 | Not Available | Negative | 1245336 - 1245611 | 10019.6 |
| methylmalonyl-coa epimerase /ethylmalonyl-coa epimerase | CLV75_1265 | Not Available | Negative | 1245617 - 1246021 | 14406.3 |
| response regulator receiver domain-containing protein | CLV75_1266 | Not Available | Positive | 1246157 - 1246873 | 25770.8 |
| aspartyl-trna synthetase | CLV75_1267 | Not Available | Negative | 1247105 - 1248880 | 66416.0 |
| caax prenyl protease-like protein | CLV75_1268 | Not Available | Negative | 1248960 - 1249631 | 25687.7 |
| 4-amino-4-deoxychorismate lyase | CLV75_1269 | Not Available | Negative | 1249628 - 1250275 | 24281.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
