Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | CLV75_1230 | Not Available | Negative | 1214691 - 1215248 | 19879.5 |
| asnc family transcriptional regulator | CLV75_1231 | Not Available | Negative | 1215280 - 1215765 | 17814.6 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | CLV75_1232 | Not Available | Positive | 1215869 - 1219267 | 121733.0 |
| membrane associated rhomboid family serine protease | CLV75_1233 | Not Available | Positive | 1219310 - 1220053 | 27143.7 |
| iclr family transcriptional regulator | CLV75_1234 | Not Available | Negative | 1220061 - 1220882 | 29910.6 |
| serine-glyoxylate aminotransferase | CLV75_1235 | Not Available | Positive | 1221086 - 1222276 | 42658.0 |
| threonine dehydratase | CLV75_1236 | Not Available | Positive | 1222288 - 1223259 | 34842.5 |
| d-3-hydroxyaspartate aldolase | CLV75_1237 | Not Available | Positive | 1223271 - 1224434 | 41989.8 |
| ornithine cyclodeaminase | CLV75_1238 | Not Available | Positive | 1224510 - 1225475 | 34024.4 |
| myo-inositol-1(or 4)-monophosphatase | CLV75_1239 | Not Available | Negative | 1225533 - 1226318 | 28422.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
