Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_1217 | Not Available | Negative | 1194471 - 1197560 | 112070.0 |
| adenylate cyclase | CLV75_1219 | Not Available | Negative | 1198618 - 1200327 | 62420.2 |
| 5-oxoprolinase (atp-hydrolysing) | CLV75_1222 | Not Available | Negative | 1202263 - 1205847 | 127633.0 |
| tripartite atp-independent transporter dctm subunit | CLV75_1223 | Not Available | Negative | 1205919 - 1207202 | 45644.5 |
| trap-type mannitol/chloroaromatic compound transport system permease small subunit | CLV75_1224 | Not Available | Negative | 1207207 - 1207770 | 20252.4 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV75_1225 | Not Available | Negative | 1207835 - 1208872 | 36815.6 |
| uncharacterized protein ycsi (upf0317 family) | CLV75_1226 | Not Available | Negative | 1208893 - 1209708 | 29678.2 |
| dna-binding transcriptional lysr family regulator | CLV75_1227 | Not Available | Negative | 1209796 - 1210677 | 31969.7 |
| hypothetical protein | CLV75_1228 | Not Available | Positive | 1210928 - 1212571 | 61269.2 |
| hypothetical protein | CLV75_1229 | Not Available | Positive | 1212742 - 1214631 | 67916.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
