Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_1207 | Not Available | Positive | 1180826 - 1182820 | 74833.9 |
| peptide/nickel transport system substrate-binding protein | CLV75_1208 | Not Available | Positive | 1182945 - 1184531 | 57892.1 |
| peptide/nickel transport system permease protein | CLV75_1209 | Not Available | Positive | 1184547 - 1185503 | 34372.2 |
| peptide/nickel transport system permease protein | CLV75_1210 | Not Available | Positive | 1185500 - 1186318 | 29027.3 |
| peptide/nickel transport system atp-binding protein | CLV75_1211 | Not Available | Positive | 1186315 - 1187952 | 59425.7 |
| type i phosphodiesterase/nucleotide pyrophosphatase | CLV75_1212 | Not Available | Positive | 1188115 - 1188951 | 31367.0 |
| acetyl esterase | CLV75_1213 | Not Available | Negative | 1188960 - 1189883 | 33629.2 |
| fatty-acyl-coa synthase/long-chain acyl-coa synthetase | CLV75_1214 | Not Available | Negative | 1189896 - 1191785 | 68962.7 |
| atp-binding cassette subfamily b protein | CLV75_1215 | Not Available | Negative | 1191944 - 1193764 | 65590.6 |
| Trna-gly | Not Available | Not Available | Positive | 1194047 - 1194120 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
