Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter transmembrane protein | CLV75_0086 | Not Available | Negative | 86819 - 87772 | 34968.2 |
| hypothetical protein | CLV75_0087 | Not Available | Negative | 87863 - 88600 | 26819.0 |
| rsam/selenodomain-associated transferase 2 | CLV75_0088 | Not Available | Positive | 88674 - 89348 | 24368.3 |
| hypothetical protein | CLV75_0089 | Not Available | Negative | 89224 - 90111 | 32326.7 |
| rpir family transcriptional regulator | CLV75_0090 | Not Available | Negative | 90193 - 91062 | 32973.6 |
| putative n-formylglutamate amidohydrolase | CLV75_0091 | Not Available | Positive | 91186 - 91980 | 29120.7 |
| trap-type mannitol/chloroaromatic compound transport system permease small subunit | CLV75_0092 | Not Available | Positive | 91977 - 92558 | 22092.4 |
| tripartite atp-independent transporter dctm subunit | CLV75_0093 | Not Available | Positive | 92555 - 93874 | 47971.0 |
| secreted protein | CLV75_0094 | Not Available | Positive | 93926 - 94960 | 38688.6 |
| pimeloyl-acp methyl ester carboxylesterase | CLV75_0095 | Not Available | Positive | 95296 - 96066 | 28329.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
