Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| di/tricarboxylate transporter | CLV75_1167 | Not Available | Negative | 1148432 - 1150210 | 63314.6 |
| hypothetical protein | CLV75_1168 | Not Available | Negative | 1150302 - 1151114 | 29362.4 |
| hypothetical protein | CLV75_1169 | Not Available | Positive | 1151202 - 1151429 | 7970.28 |
| 5-formyltetrahydrofolate cyclo-ligase | CLV75_1170 | Not Available | Negative | 1151426 - 1151998 | 20362.4 |
| magnesium transporter | CLV75_1171 | Not Available | Negative | 1151995 - 1153389 | 50805.9 |
| guanine deaminase | CLV75_1172 | Not Available | Positive | 1153529 - 1154818 | 47061.6 |
| cytosine/adenosine deaminase-related metal-dependent hydrolase | CLV75_1173 | Not Available | Negative | 1154884 - 1156218 | 47783.1 |
| histidinol phosphatase-like enzyme (inositol monophosphatase family) | CLV75_1174 | Not Available | Negative | 1156333 - 1157124 | 28175.4 |
| xre family transcriptional regulator | CLV75_1175 | Not Available | Negative | 1157169 - 1157540 | 14150.0 |
| nadph2:quinone reductase | CLV75_1176 | Not Available | Positive | 1157877 - 1158845 | 34159.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
