Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfopyruvate decarboxylase subunit alpha | CLV75_1107 | Not Available | Negative | 1088346 - 1088852 | 18681.7 |
| nucleotide-binding universal stress uspa family protein | CLV75_1108 | Not Available | Negative | 1088912 - 1089322 | 14662.4 |
| threonine dehydrogenase-like zn-dependent dehydrogenase | CLV75_1109 | Not Available | Negative | 1089353 - 1090333 | 34416.6 |
| gluconate 5-dehydrogenase | CLV75_1110 | Not Available | Negative | 1090330 - 1091091 | 26282.2 |
| sulfopropanediol 3-dehydrogenase | CLV75_1111 | Not Available | Negative | 1091084 - 1092391 | 46870.6 |
| tripartite atp-independent transporter dctm subunit | CLV75_1112 | Not Available | Negative | 1092404 - 1093732 | 46076.4 |
| trap-type c4-dicarboxylate transport system permease small subunit | CLV75_1113 | Not Available | Negative | 1093744 - 1094256 | 19607.4 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV75_1114 | Not Available | Negative | 1094368 - 1095513 | 41056.6 |
| hypothetical protein | CLV75_1115 | Not Available | Negative | 1095536 - 1095721 | 6376.88 |
| laci family transcriptional regulator | CLV75_1116 | Not Available | Positive | 1095853 - 1096881 | 37333.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
