Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dcc family thiol-disulfide oxidoreductase yuxk | CLV75_1087 | Not Available | Negative | 1068028 - 1068501 | 18194.1 |
| arac-like dna-binding protein | CLV75_1088 | Not Available | Positive | 1068786 - 1069811 | 38026.6 |
| rna polymerase rpod-like sigma 70 subunit /rna polymerase rpos-like sigma 38 subunit | CLV75_1089 | Not Available | Negative | 1069977 - 1071965 | 75322.4 |
| dna primase | CLV75_1090 | Not Available | Negative | 1072080 - 1074029 | 72521.4 |
| hypothetical protein | CLV75_1091 | Not Available | Negative | 1074110 - 1074406 | 10937.2 |
| glutamate dehydrogenase (nad(p)+) | CLV75_1092 | Not Available | Negative | 1074786 - 1076216 | 52702.9 |
| putative flp pilus-assembly tade/g-like protein | CLV75_1093 | Not Available | Positive | 1076542 - 1078362 | 68408.8 |
| hypothetical protein | CLV75_1094 | Not Available | Positive | 1078359 - 1078982 | 23113.5 |
| hypothetical protein | CLV75_1095 | Not Available | Positive | 1078969 - 1079562 | 22514.9 |
| hypothetical protein | CLV75_1096 | Not Available | Negative | 1079563 - 1080033 | 17137.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
