Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-amino acid n-acyltransferase ynca | CLV75_1067 | Not Available | Negative | 1053519 - 1054001 | 18173.7 |
| hypothetical protein | CLV75_1068 | Not Available | Positive | 1054080 - 1054268 | 6718.85 |
| hypothetical protein | CLV75_1069 | Not Available | Negative | 1054265 - 1054750 | 18396.2 |
| arsr family transcriptional regulator | CLV75_1070 | Not Available | Positive | 1054799 - 1055119 | 12241.8 |
| uncharacterized protein yndb with ahsa1/start domain | CLV75_1071 | Not Available | Positive | 1055116 - 1055541 | 15863.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1055584 - 1055739 | Not Available |
| hypothetical protein | CLV75_1073 | Not Available | Negative | 1055758 - 1056063 | 11050.8 |
| nusb antitermination factor | CLV75_1074 | Not Available | Negative | 1056123 - 1056605 | 17874.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | CLV75_1075 | Not Available | Negative | 1056602 - 1057153 | 19007.8 |
| gtp cyclohydrolase ii /3,4-dihydroxy-2-butanone 4-phosphate synthase | CLV75_1076 | Not Available | Negative | 1057156 - 1058379 | 44286.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
