Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit delta | CLV75_1057 | Not Available | Negative | 1045620 - 1045949 | 12423.5 |
| sarcosine oxidase subunit beta | CLV75_1058 | Not Available | Negative | 1046026 - 1047270 | 45137.1 |
| cytochrome c-type biogenesis protein ccmh | CLV75_1059 | Not Available | Positive | 1047448 - 1048677 | 44217.6 |
| putative holliday junction resolvase | CLV75_1060 | Not Available | Positive | 1048674 - 1049138 | 16938.6 |
| hypothetical protein | CLV75_1061 | Not Available | Positive | 1049156 - 1049389 | 8977.87 |
| spoiiaa-like protein | CLV75_1062 | Not Available | Negative | 1049889 - 1050617 | 26545.6 |
| hypothetical protein | CLV75_1063 | Not Available | Negative | 1050654 - 1051439 | 28646.6 |
| putative membrane protein yfca | CLV75_1064 | Not Available | Negative | 1051433 - 1052257 | 28541.3 |
| pp_01045 | CLV75_1065 | Not Available | Negative | 1052286 - 1053305 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 1053395 - 1053471 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
