Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_1047 | Not Available | Negative | 1034102 - 1034425 | 11380.3 |
| atp-binding cassette subfamily b protein | CLV75_1048 | Not Available | Negative | 1034563 - 1036374 | 66669.9 |
| lysm domain-containing protein | CLV75_1049 | Not Available | Negative | 1036434 - 1037795 | 48082.0 |
| hypothetical protein | CLV75_1050 | Not Available | Positive | 1037922 - 1038473 | 19910.0 |
| protein required for attachment to host cells | CLV75_1051 | Not Available | Negative | 1038520 - 1038972 | 16592.2 |
| eama domain-containing membrane protein rard | CLV75_1052 | Not Available | Positive | 1039340 - 1040266 | 32387.6 |
| fe-mn family superoxide dismutase | CLV75_1053 | Not Available | Negative | 1040397 - 1040996 | 22012.6 |
| fkbm family methyltransferase | CLV75_1054 | Not Available | Positive | 1041098 - 1041865 | 28465.3 |
| sarcosine oxidase subunit gamma | CLV75_1055 | Not Available | Negative | 1041976 - 1042542 | 20098.2 |
| sarcosine oxidase subunit alpha | CLV75_1056 | Not Available | Negative | 1042535 - 1045549 | 109833.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
