Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit yajc | CLV75_1037 | Not Available | Negative | 1019841 - 1020128 | 10489.1 |
| mechanosensitive ion channel-like protein | CLV75_1038 | Not Available | Positive | 1020321 - 1021985 | 61843.2 |
| seryl-trna synthetase | CLV75_1039 | Not Available | Positive | 1022058 - 1023350 | 47379.1 |
| helix-hairpin-helix protein | CLV75_1040 | Not Available | Negative | 1023401 - 1024009 | 21273.1 |
| omega-6 fatty acid desaturase (delta-12 desaturase) | CLV75_1041 | Not Available | Negative | 1024095 - 1025081 | 38087.9 |
| gtp-binding protein | CLV75_1042 | Not Available | Negative | 1025246 - 1026709 | 53570.7 |
| outer membrane protein assembly factor bamb | CLV75_1043 | Not Available | Negative | 1026758 - 1028080 | 45807.1 |
| hypothetical protein | CLV75_1044 | Not Available | Negative | 1028122 - 1028793 | 23637.9 |
| multidrug efflux system membrane fusion protein | CLV75_1045 | Not Available | Positive | 1029020 - 1030243 | 43203.5 |
| multidrug efflux pump | CLV75_1046 | Not Available | Positive | 1030240 - 1034055 | 137307.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
