Tardiphaga robiniae

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Tardiphaga

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusTardiphaga
SpeciesTardiphaga robiniae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tardiphaga robiniae strain Vaf-07 contig_9, whole genome shotgun

Gene Summary

Adenine Count

1220095 bp

Thymine Count

1226912 bp

Guanine Count

1956750 bp

Cytosine Count

1956458 bp

Genome Length

6360215 bp

Protein-coding Genes

5722 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinA4A58_12490Not AvailableNegative4668753 - 466947525865.8
abc transporter atp-binding proteinA4A58_12495Not AvailableNegative4669487 - 467031730245.6
branched-chain amino acid abc transporter permeaseA4A58_12500Not AvailableNegative4670314 - 467164247636.4
branched-chain amino acid abc transporter permease livhA4A58_12505Not AvailableNegative4671647 - 467256432822.5
gamma-carboxymuconolactone decarboxylaseA4A58_12515Not AvailableNegative4673971 - 467436014377.2
3-oxoadipate enol-lactonaseA4A58_12520Not AvailableNegative4674374 - 467515328071.0
3-carboxy-cis,cis-muconate cycloisomeraseA4A58_12525Not AvailableNegative4675177 - 467652647132.2
carbon monoxide dehydrogenaseA4A58_12530Not AvailablePositive4676737 - 467718315288.4
carbon monoxide dehydrogenaseA4A58_12535Not AvailablePositive4677356 - 467784117190.9
carbon monoxide dehydrogenaseA4A58_12540Not AvailablePositive4677922 - 467872828460.5

Displaying genes 4301 – 4310 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.