Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanomicrobiales
Family
Methanomicrobiaceae
Genus
Methanoplanus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanomicrobiales |
| Family | Methanomicrobiaceae |
| Genus | Methanoplanus |
| Species | Methanoplanus limicola |
| Strain | DSM 2279 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanoplanus limicola DSM 2279 chromosome, whole genome shotgun
Gene Summary
Adenine Count
966608 bp
Thymine Count
883032 bp
Guanine Count
659849 bp
Cytosine Count
690757 bp
Genome Length
3200946 bp
Protein-coding Genes
3063 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fibrillarin-like rrna/trna 2'-o-methyltransferase | METLIM_RS04815 | Not Available | Negative | 1008923 - 1009537 | 22611.5 |
| rrna biogenesis protein nop56/nop58 | METLIM_RS04820 | Not Available | Negative | 1009534 - 1010439 | 33712.8 |
| calcium/sodium antiporter | METLIM_RS04825 | Not Available | Positive | 1010717 - 1011634 | 32154.4 |
| tripartite tricarboxylate transporter permease | METLIM_RS04830 | Not Available | Negative | 1011756 - 1012961 | 41759.4 |
| uroporphyrinogen-iii synthase | METLIM_RS04835 | Not Available | Positive | 1013113 - 1013802 | 25211.1 |
| rna-guided pseudouridylation complex pseudouridine synthase subunit cbf5 | METLIM_RS04840 | Not Available | Positive | 1013804 - 1014745 | 34361.2 |
| Trna-ser | Not Available | Not Available | Positive | 1014987 - 1015072 | Not Available |
| hypothetical protein | METLIM_RS04850 | Not Available | Negative | 1015265 - 1015600 | 13567.8 |
| duf2179 domain-containing protein | METLIM_RS04865 | Not Available | Negative | 1016679 - 1017263 | 21423.4 |
| duf2178 domain-containing protein | METLIM_RS04870 | Not Available | Positive | 1017388 - 1017819 | 16258.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.