Oxalobacteraceae bacterium IMCC9480

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Description

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oxalobacteraceae bacterium IMCC9480 ctg_8777, whole genome shotgun

Gene Summary

Adenine Count

913696 bp

Thymine Count

912825 bp

Guanine Count

1340971 bp

Cytosine Count

1334007 bp

Genome Length

4501499 bp

Protein-coding Genes

4019 genes

Non-Coding Genes

31 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system sensor atpaseIMCC9480_1533P0AD15Positive4002621 - 400330725798.5
putative two component system response regulator (lyr/algr family)IMCC9480_1534P26275Positive4003304 - 400411629676.2
circadian clock protein kaicIMCC9480_1535Q7U8R3Negative4004156 - 400560753165.3
hypothetical proteinIMCC9480_1536Not AvailableNegative4005604 - 40058287915.53
putative two-component hybrid sensor and regulatorIMCC9480_1537P30855Negative4006129 - 400719038062.3
putative formate dehydrogenase-specific chaperoneIMCC9480_1549Not AvailableNegative4007846 - 400846322727.0
iron-sulfur cluster-binding proteinIMCC9480_1550Not AvailableNegative4008463 - 401010658394.9
atp-dependent dna helicase repIMCC9480_1551P44804Negative4010548 - 401262678231.7
peptidase m16-like proteinIMCC9480_1552Not AvailableNegative4012657 - 401370637362.6
hypothetical proteinIMCC9480_1556Not AvailablePositive4014045 - 401433810273.2

Displaying genes 3631 – 3640 of 4050 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

225 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 225 metabolites

Health Effects

No health effects information available for this bacterium.