Oxalobacteraceae bacterium IMCC9480

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Description

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oxalobacteraceae bacterium IMCC9480 ctg_8777, whole genome shotgun

Gene Summary

Adenine Count

913696 bp

Thymine Count

912825 bp

Guanine Count

1340971 bp

Cytosine Count

1334007 bp

Genome Length

4501499 bp

Protein-coding Genes

4019 genes

Non-Coding Genes

31 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-export membrane protein secfIMCC9480_2444E9RGS4Positive1686472 - 168741034593.6
peptide chain release factor 3IMCC9480_2445Q5FA25Positive1687588 - 168804316680.9
hypothetical proteinIMCC9480_2446Not AvailablePositive1688624 - 16888187144.49
hypothetical proteinIMCC9480_2447Not AvailableNegative1688812 - 16889254462.44
ssu ribosomal protein s14p (s29e) zinc-independentIMCC9480_2449A6T3J1Negative1689373 - 168967811509.2
lsu ribosomal protein l5p (l11e)IMCC9480_2450Not AvailableNegative1689686 - 168996410499.7
lsu ribosomal protein l5p (l11e)IMCC9480_2451A6T3J2Negative1690011 - 16902268089.89
lsu ribosomal protein l24p (l26e)IMCC9480_2452A6T3J3Negative1690232 - 169054610983.6
lsu ribosomal protein l14p (l23e)IMCC9480_2453A4G9S8Negative1690556 - 169092413365.6
ssu ribosomal protein s17p (s11e)IMCC9480_2454B2JI57Negative1691139 - 169141410288.7

Displaying genes 1531 – 1540 of 4050 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

225 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 225 metabolites

Health Effects

No health effects information available for this bacterium.