Halococcus morrhuae DSM 1307

Gram-negativeCocciAerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halococcaceae

Genus

Halococcus

Description

Halococcus morrhuae DSM 1307 is a gram-positive, coccoid-shaped microbe that thrives in psychrotolerant temperatures, classified as a chemoheterotroph, and can be found in various body sites of fish, such as the gills, skin, and gut, across different species. As a gram-positive microbe, its cell wall is composed of a thick peptidoglycan layer, providing resistance to extreme environments. The coccoid shape of Halococcus morrhuae allows it to maintain a stable structure, even in high-salt concentrations. Its psychrotolerant nature enables it to survive in a wide range of temperatures, from -20°C to 40°C, making it a versatile microbe. As a chemoheterotroph, Halococcus morrhuae relies on organic compounds for energy and carbon, which it obtains from its surroundings. This microbe can be found in various fish body sites, including the gills, skin, and gut, where it plays a role in the decomposition of organic matter. Halococcus morrhuae is an obligate aerobe, requiring oxygen to grow and survive, which is reflected in its ability to thrive in environments with high oxygen levels. The microbe's ability to tolerate high salt concentrations and survive in a wide range of temperatures makes it a unique organism. Halococcus morrhuae DSM 1307 has been found to produce carotenoid pigments, which provide protection against excessive light and oxidative stress, allowing it to thrive in environments with high levels of radiation.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalococcaceae
GenusHalococcus
SpeciesHalococcus morrhuae
StrainDSM 1307

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halococcus morrhuae DSM 1307 contig_167, whole genome shotgun

Gene Summary

Adenine Count

541226 bp

Thymine Count

540271 bp

Guanine Count

953930 bp

Cytosine Count

955852 bp

Genome Length

2991556 bp

Protein-coding Genes

3035 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine hydroxymethyltransferaseC448_15416Not AvailablePositive2971923 - 297316744652.4
short-chain family oxidoreductaseC448_15421Not AvailableNegative2973321 - 297407625467.3
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolaseC448_15426Not AvailablePositive2974221 - 297516533310.6
endonucleaseC448_15431Not AvailableNegative2975178 - 297586423855.6
hypothetical proteinC448_15436Not AvailableNegative2976020 - 297673625678.7
hypothetical proteinC448_15441Not AvailableNegative2977327 - 297871550512.9
amidohydrolaseC448_15446Not AvailablePositive2979088 - 298012236884.0
universal stress protein uspa-like proteinC448_15451Not AvailablePositive2980148 - 298064517368.0
biotin--acetyl-coa-carboxylase ligaseC448_15456Not AvailableNegative2980642 - 298155932582.2
hypothetical proteinC448_15461Not AvailableNegative2981836 - 298245322530.3

Displaying genes 3061 – 3070 of 3079 in total

Metabolites

635 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 635 metabolites

Health Effects

No health effects information available for this bacterium.