Halococcus morrhuae DSM 1307

Gram-negativeCocciAerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halococcaceae

Genus

Halococcus

Description

Halococcus morrhuae DSM 1307 is a gram-positive, coccoid-shaped microbe that thrives in psychrotolerant temperatures, classified as a chemoheterotroph, and can be found in various body sites of fish, such as the gills, skin, and gut, across different species. As a gram-positive microbe, its cell wall is composed of a thick peptidoglycan layer, providing resistance to extreme environments. The coccoid shape of Halococcus morrhuae allows it to maintain a stable structure, even in high-salt concentrations. Its psychrotolerant nature enables it to survive in a wide range of temperatures, from -20°C to 40°C, making it a versatile microbe. As a chemoheterotroph, Halococcus morrhuae relies on organic compounds for energy and carbon, which it obtains from its surroundings. This microbe can be found in various fish body sites, including the gills, skin, and gut, where it plays a role in the decomposition of organic matter. Halococcus morrhuae is an obligate aerobe, requiring oxygen to grow and survive, which is reflected in its ability to thrive in environments with high oxygen levels. The microbe's ability to tolerate high salt concentrations and survive in a wide range of temperatures makes it a unique organism. Halococcus morrhuae DSM 1307 has been found to produce carotenoid pigments, which provide protection against excessive light and oxidative stress, allowing it to thrive in environments with high levels of radiation.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalococcaceae
GenusHalococcus
SpeciesHalococcus morrhuae
StrainDSM 1307

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halococcus morrhuae DSM 1307 contig_167, whole genome shotgun

Gene Summary

Adenine Count

541226 bp

Thymine Count

540271 bp

Guanine Count

953930 bp

Cytosine Count

955852 bp

Genome Length

2991556 bp

Protein-coding Genes

3035 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
6-phosphogluconate dehydrogenase-like proteinC448_13396Not AvailableNegative2569921 - 257096138235.3
air synthase-related protein domain proteinC448_13401Not AvailableNegative2571088 - 257297467654.9
isocitrate lyaseC448_13406Not AvailableNegative2573760 - 257481539317.0
hypothetical proteinC448_13411Not AvailablePositive2575004 - 257549517020.3
cytochrome c oxidase subunit iC448_13416Not AvailablePositive2575609 - 257737564827.9
hypothetical proteinC448_13421Not AvailableNegative2577377 - 257855241457.3
beta-lactamaseC448_13426Not AvailableNegative2578606 - 257943630332.9
hypothetical proteinC448_13431Not AvailableNegative2579484 - 258010723391.4
pterin-4-alpha-carbinolamine dehydrataseC448_13436Not AvailableNegative2580171 - 258044610423.5
dna primaseC448_13441Not AvailablePositive2580629 - 258205949881.5

Displaying genes 2661 – 2670 of 3079 in total

Metabolites

635 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 635 metabolites

Health Effects

No health effects information available for this bacterium.