Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Com translational regulator | CD58_RS29355 | Not Available | Negative | 4174977 - 4175204 | 8420.25 |
| Putative tail-fiber protein | CD58_RS17540 | Not Available | Negative | 4175180 - 4175689 | 18499.1 |
| Spore coat protein | CD58_RS31255 | Not Available | Negative | 4175683 - 4176624 | 31008.6 |
| Gp25, tail fiber | CD58_RS17550 | Not Available | Negative | 4176624 - 4177169 | 20269.6 |
| Baseplate protein | CD58_RS17555 | Not Available | Negative | 4177162 - 4178283 | 40287.9 |
| Putative phage tail protein | CD58_RS17560 | Not Available | Negative | 4178267 - 4178644 | 14004.9 |
| hypothetical protein | CD58_RS17565 | Not Available | Positive | 4178754 - 4179527 | 28692.2 |
| Putative baseplate protein | CD58_RS17570 | Not Available | Negative | 4179524 - 4180057 | 18877.3 |
| Tail protein | CD58_RS17575 | Not Available | Negative | 4180054 - 4181106 | 38810.0 |
| Gp20, phage tail protein x | CD58_RS17580 | Not Available | Negative | 4181094 - 4181300 | 7760.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
