Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | CD58_RS06075 | Not Available | Positive | 1410629 - 1411645 | 36898.3 |
| Glycoside hydrolase family 19 protein | CD58_RS06080 | Not Available | Positive | 1411718 - 1412281 | 20881.7 |
| Lysozyme | CD58_RS06085 | Not Available | Positive | 1412263 - 1412799 | 19174.9 |
| cina family protein | CD58_RS06090 | Not Available | Positive | 1412871 - 1413371 | 17631.8 |
| Dna strand exchange and recombination protein with protease and nuclease activity | CD58_RS06095 | Not Available | Positive | 1413455 - 1414507 | 37247.0 |
| recombination regulator recx | CD58_RS06100 | Not Available | Positive | 1414516 - 1414983 | 17953.5 |
| Hypothetical protein | CD58_RS06105 | Not Available | Negative | 1415030 - 1416148 | 42646.0 |
| hypothetical protein | CD58_RS06110 | Not Available | Positive | 1416604 - 1416798 | 7508.93 |
| quorum-sensing-regulated virulence factor family protein | CD58_RS06115 | Not Available | Negative | 1416799 - 1417221 | 15398.7 |
| Gp127 | CD58_RS17535 | Not Available | Negative | 4174165 - 4175016 | 30877.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
