Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis factor yjga | CD58_RS04380 | Not Available | Negative | 1058919 - 1059443 | 20185.2 |
| metalloprotease pmba | CD58_RS04385 | Not Available | Positive | 1059573 - 1060919 | 47911.7 |
| hypothetical protein | CD58_RS04390 | Not Available | Positive | 1061227 - 1061622 | 15324.4 |
| class ii fumarate hydratase | CD58_RS04395 | Not Available | Positive | 1061615 - 1062991 | 48756.1 |
| hypothetical protein | CD58_RS04400 | Not Available | Positive | 1063019 - 1063459 | 16790.0 |
| superoxide dismutase | CD58_RS04405 | Not Available | Positive | 1063462 - 1064073 | 22505.5 |
| zip family metal transporter | CD58_RS04410 | Not Available | Positive | 1064104 - 1064994 | 30343.3 |
| hpr family phosphocarrier protein | CD58_RS04415 | Not Available | Negative | 1065188 - 1065463 | 9938.01 |
| rnase adapter rapz | CD58_RS04420 | Not Available | Negative | 1065479 - 1066336 | 32189.5 |
| pts iia-like nitrogen regulatory protein ptsn | CD58_RS04425 | Not Available | Negative | 1066339 - 1066803 | 16794.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
