Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | CD58_RS04330 | Not Available | Negative | 1045538 - 1046989 | 51617.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | CD58_RS04335 | Not Available | Negative | 1047006 - 1047293 | 10283.2 |
| rod shape-determining protein mreb | CD58_RS04340 | Not Available | Positive | 1047508 - 1048545 | 37005.8 |
| rod shape-determining protein mrec | CD58_RS04345 | Not Available | Positive | 1048688 - 1049821 | 40016.4 |
| rod shape-determining protein mred | CD58_RS04350 | Not Available | Positive | 1049818 - 1050306 | 18169.2 |
| maf family protein | CD58_RS04355 | Not Available | Positive | 1050345 - 1050941 | 21177.5 |
| ribonuclease g | CD58_RS04360 | Not Available | Positive | 1050998 - 1052455 | 54627.1 |
| yhdp family protein | CD58_RS04365 | Not Available | Positive | 1052516 - 1056319 | 136627.0 |
| carbon-nitrogen hydrolase family protein | CD58_RS04370 | Not Available | Positive | 1056460 - 1057323 | 31100.2 |
| metalloprotease tldd | CD58_RS04375 | Not Available | Positive | 1057329 - 1058771 | 50029.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
