Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS04280 | Not Available | Negative | 1034466 - 1034825 | 12694.0 |
| 5-dehydro-4-deoxyglucarate dehydratase | CD58_RS04285 | Not Available | Positive | 1035195 - 1036106 | 32743.3 |
| aldehyde dehydrogenase family protein | CD58_RS04290 | Not Available | Positive | 1036236 - 1037681 | 51117.9 |
| mfs transporter | CD58_RS04295 | Not Available | Positive | 1037767 - 1039131 | 49323.0 |
| galactarate dehydratase | CD58_RS04300 | Not Available | Positive | 1039145 - 1040698 | 56444.3 |
| aec family transporter | CD58_RS04305 | Not Available | Positive | 1040962 - 1041903 | 33877.2 |
| carboxymuconolactone decarboxylase family protein | CD58_RS04310 | Not Available | Negative | 1042031 - 1042411 | 13852.6 |
| calcium/sodium antiporter | CD58_RS04315 | Not Available | Negative | 1042408 - 1043469 | 37512.5 |
| septal ring lytic transglycosylase rlpa family protein | CD58_RS04320 | Not Available | Negative | 1043519 - 1043896 | 13560.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | CD58_RS04325 | Not Available | Negative | 1044082 - 1045527 | 52923.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
