Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CD58_RS04180 | Not Available | Negative | 1008623 - 1009339 | 24857.6 |
| peptide chain release factor 3 | CD58_RS04185 | Not Available | Positive | 1009674 - 1011257 | 59614.4 |
| hypothetical protein | CD58_RS04190 | Not Available | Positive | 1011604 - 1011846 | 8735.96 |
| hypothetical protein | CD58_RS04195 | Not Available | Positive | 1012779 - 1013150 | 14044.1 |
| hypothetical protein | CD58_RS04200 | Not Available | Positive | 1013537 - 1013986 | 16361.1 |
| peptide abc transporter atp-binding protein | CD58_RS04205 | Not Available | Negative | 1014148 - 1015128 | 36127.7 |
| abc transporter atp-binding protein | CD58_RS04210 | Not Available | Negative | 1015128 - 1016096 | 34877.8 |
| abc transporter permease subunit | CD58_RS04215 | Not Available | Negative | 1016107 - 1017018 | 32523.7 |
| metal abc transporter atp-binding protein | CD58_RS04220 | Not Available | Negative | 1017029 - 1018020 | 35566.3 |
| metal abc transporter atp-binding protein | CD58_RS04225 | Not Available | Negative | 1018094 - 1019689 | 56948.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
