Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catabolite repressor/activator | CD58_RS04130 | Not Available | Negative | 992467 - 993462 | 36485.7 |
| phosphoenolpyruvate--protein phosphotransferase | CD58_RS04135 | Not Available | Positive | 993751 - 996615 | 101840.0 |
| 1-phosphofructokinase | CD58_RS04140 | Not Available | Positive | 996615 - 997556 | 32650.2 |
| pts fructose-like transporter subunit iib | CD58_RS04145 | Not Available | Positive | 997570 - 999312 | 60085.4 |
| alkaline phosphatase d family protein | CD58_RS04150 | Not Available | Positive | 999508 - 1001049 | 57743.4 |
| sulfite reductase flavoprotein subunit alpha | CD58_RS04155 | Not Available | Negative | 1001190 - 1003715 | 92908.9 |
| type iii plp-dependent enzyme | CD58_RS04160 | Not Available | Negative | 1004069 - 1005232 | 43454.1 |
| betaine/proline/choline family abc transporter atp-binding protein | CD58_RS04165 | Not Available | Negative | 1005873 - 1007030 | 43177.0 |
| abc transporter permease | CD58_RS04170 | Not Available | Negative | 1007027 - 1007680 | 22982.4 |
| glycine betaine abc transporter substrate-binding protein | CD58_RS04175 | Not Available | Negative | 1007696 - 1008598 | 33130.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
