Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | CD58_RS04080 | Not Available | Positive | 980897 - 983002 | 74979.4 |
| Trna-thr | Not Available | Not Available | Positive | 983128 - 983203 | Not Available |
| hypothetical protein | CD58_RS04090 | Not Available | Negative | 983214 - 983759 | 19978.3 |
| duf6388 family protein | CD58_RS04095 | Not Available | Positive | 984063 - 984368 | 11778.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | CD58_RS04100 | Not Available | Negative | 984446 - 985294 | 30381.7 |
| duf1631 domain-containing protein | CD58_RS04105 | Not Available | Positive | 985564 - 987777 | 82448.9 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | CD58_RS04110 | Not Available | Positive | 987842 - 988402 | 20369.8 |
| regulatory signaling modulator protein ampe | CD58_RS04115 | Not Available | Positive | 988399 - 989235 | 31248.5 |
| methyl-accepting chemotaxis protein | CD58_RS04120 | Not Available | Positive | 989531 - 991561 | 72697.8 |
| tatd family hydrolase | CD58_RS04125 | Not Available | Negative | 991687 - 992463 | 28832.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
